ihcams-decoy · DecoyCyc10

Decoy peptide design service (Cyc10)

Upload an antigen PDB and enter epitope residues ≤ 20. Run once to obtain candidates from Path A (Design → Score) and Path B (Diffusion).
Important: Please ensure the target antigen chain is named chain A in the uploaded PDB (epitope residues should be annotated as A:resi).
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What you get

  • Path A: sample 1000 sequences → build complex/npz → AtomAXv3 scoring → top candidates
  • Path B: structure-guided diffusion → 1000 sequences + p_good probability
  • Each candidate: bind_score_z_pred / hit10 / offtarget_pred

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